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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904900.1_cds_XP_016454994.1_48967
CDS Infomation

[gene=LOC107779152] [db_xref=GeneID:107779152] [protein=probable protein phosphatase 2C 48 isoform X3] [protein_id=XP_016454994.1] [location=complement(join(87517..87527,87957..88014,88211..88447,90555..90922,94509..94842))] [gbkey=CDS]
Sequence

ATGGTGACAACTACATTGAGAAAGTTTGTATACCCTTGTTGGAAGCCTTCGATAGAGAAT
GAAGGTGAGAATAGCAGCACTAGAGGTGGAGATCCAGATGGCCGGGTTGATGGATTGTGG
TGGTACAAAGATTCGGGGCATCATGTAAATGGCGAGTTTTCAATGGCTGTAATTCAAGCA
AATAGTGTGTTAGAGGATCAGTGCCAGCTTGAATCCGGGCCATTGAGTTTGGTGGATACA
GGTCCTCAAGGGACCTTTGTCGGAGTTTATGATGGCCATGCTGGTCCAGAAGCTGCCCGC
TTCATAAATGACCGCCTTTTTGAGAACCTCAAGAAATTCACCTCAGAGGATCAAGGAATG
TCAGCTGATGTCATAAGCAAGGCATATTTGGCTACAGAAGAGGAGTTTCTTTCTCTAGTG
AGAAAGCAATGGCTAATTAAACCCCACATTGCTTCTGTGGGATCATGTTGTTTAGTGGGT
ATAATATGCAATGGGATGTTATACATTGCAAATGCTGGAGACTCTCGTGCGGTATTAGGA
AGAGAAGAGGGGGATCTGAAAGAGGTCAAAGCTATTCAATTGTCGTCTGAACACAATGCG
AATTTGGAATCTGTCCGGGAGGAACTACGCTCTCTTCATCCTGATGATCCACAGGTAGTG
GTATTAAAGCACAAGGTTTGGCGTGTGAAGGGTATTATACAGGTTTCAAGATCGATTGGT
GATGCATATTTGAAGAGAGCAGAGTTTAATAGAGAGCCTTTGCTTCCTAAGTTCAGAACT
CCTGGAACATTCGAGAAGCCAATCCTTCTTGCCGAGCCATCAGTACTTGTGCACAGACTC
CTTCCTTCTGATCAGTTTCTCATATTTGCATCAGATGGCTTATGGGAGCATCTCAGCAAT
CAAGAGGCCATTGACATTGTAAACAGCTGTCCACATCATGAAAAAGGGAAAGAAAGAAAG
GAAAGTATACCAAGGAATTTGTGGAGGAAAATAACAGGGTATTGCTAG

Peptide Sequence

PEP ID

XP_016454994.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 48 isoform X3 [Nicotiana tabacum]
Sequence

MVTTTLRKFVYPCWKPSIENEGENSSTRGGDPDGRVDGLWWYKDSGHHVNGEFSMAVIQA
NSVLEDQCQLESGPLSLVDTGPQGTFVGVYDGHAGPEAARFINDRLFENLKKFTSEDQGM
SADVISKAYLATEEEFLSLVRKQWLIKPHIASVGSCCLVGIICNGMLYIANAGDSRAVLG
REEGDLKEVKAIQLSSEHNANLESVREELRSLHPDDPQVVVLKHKVWRVKGIIQVSRSIG
DAYLKRAEFNREPLLPKFRTPGTFEKPILLAEPSVLVHRLLPSDQFLIFASDGLWEHLSN
QEAIDIVNSCPHHEKGKERKESIPRNLWRKITGYC

Transcript Sequence

Gene sequence data has not been registered.